HL_6WRS_035

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGCGAUUGGAUUGC

Length

15 nucleotides

Bulged bases

6WRS|1|1|U|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRS_035 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.281

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6WRS|1|1|G|1492
6WRS|1|1|U|1493
6WRS|1|1|G|1494
6WRS|1|1|C|1495
6WRS|1|1|G|1496
6WRS|1|1|A|1497
6WRS|1|1|U|1498
6WRS|1|1|U|1499
6WRS|1|1|G|1500
6WRS|1|1|G|1501
6WRS|1|1|A|1502
6WRS|1|1|U|1503
6WRS|1|1|U|1504
6WRS|1|1|G|1505
6WRS|1|1|C|1506

Current chains

Chain 1

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L17