HL_6WRU_012

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAAUAAUC

Length

9 nucleotides

Bulged bases

6WRU|1|1|A|372, 6WRU|1|1|A|373, 6WRU|1|1|U|374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_012 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.1107

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

6WRU|1|1|G|370
6WRU|1|1|U|371
6WRU|1|1|A|372
6WRU|1|1|A|373
6WRU|1|1|U|374
6WRU|1|1|A|375
6WRU|1|1|A|376
6WRU|1|1|U|377
6WRU|1|1|C|378

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L24

Chain S

50S ribosomal protein L4