HL_6WRU_018
3D structure
- PDB id
- 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUUGUAGAA
- Length
- 10 nucleotides
- Bulged bases
- 6WRU|1|1|A|617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WRU_018 not in the Motif Atlas
- Homologous match to HL_4WF9_018
- Geometric discrepancy: 0.0887
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
6WRU|1|1|U|609
6WRU|1|1|U|610
6WRU|1|1|U|611
6WRU|1|1|U|612
6WRU|1|1|G|613
6WRU|1|1|U|614
6WRU|1|1|A|615
6WRU|1|1|G|616
6WRU|1|1|A|617
6WRU|1|1|A|618
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
- Chain D
- 50S ribosomal protein L21
- Chain L
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L32
- Chain X
- 50S ribosomal protein L15
Coloring options: