HL_6WRU_024

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGAAAUUC

Length

9 nucleotides

Bulged bases

6WRU|1|1|A|826

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_024 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.1689

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6WRU|1|1|G|823
6WRU|1|1|A|824
6WRU|1|1|G|825
6WRU|1|1|A|826
6WRU|1|1|A|827
6WRU|1|1|A|828
6WRU|1|1|U|829
6WRU|1|1|U|830
6WRU|1|1|C|831

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2