HL_6WRU_027

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAUAAGG

Length

8 nucleotides

Bulged bases

6WRU|1|1|U|1002, 6WRU|1|1|G|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_027 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1118

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

6WRU|1|1|U|999
6WRU|1|1|G|1000
6WRU|1|1|A|1001
6WRU|1|1|U|1002
6WRU|1|1|A|1003
6WRU|1|1|A|1004
6WRU|1|1|G|1005
6WRU|1|1|G|1006

Current chains

Chain 1

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L16