HL_6WRU_069

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_069 not in the Motif Atlas

Homologous match to HL_5J7L_202

Geometric discrepancy: 0.1064

The information below is about HL_5J7L_202

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6WRU|1|1|G|2876
6WRU|1|1|G|2877
6WRU|1|1|U|2878
6WRU|1|1|G|2879
6WRU|1|1|A|2880
6WRU|1|1|C|2881

Current chains

Chain 1

23S rRNA

Nearby chains

Chain A

50S ribosomal protein L19