HL_6WRU_072

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGUUAUGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_072 not in the Motif Atlas

Geometric match to HL_5J7L_212

Geometric discrepancy: 0.37

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6WRU|1|1|G|135
6WRU|1|1|A|136
6WRU|1|1|G|137
6WRU|1|1|U|138
6WRU|1|1|U|139
6WRU|1|1|A|140
6WRU|1|1|U|141
6WRU|1|1|G|142
6WRU|1|1|U|143
6WRU|1|1|C|144

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L23