HL_6WW6_001

3D structure

PDB id

6WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of EutV bound to RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CAAAGGAG

Length

8 nucleotides

Bulged bases

6WW6|1|C|G|40||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WW6_001 not in the Motif Atlas

Geometric match to HL_2OEU_002

Geometric discrepancy: 0.3771

The information below is about HL_2OEU_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02817.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6WW6|1|C|C|36||A
6WW6|1|C|A|37||A
6WW6|1|C|A|38||A
6WW6|1|C|A|39||A
6WW6|1|C|G|40||A
6WW6|1|C|G|41||A
6WW6|1|C|A|42||A
6WW6|1|C|G|43||A

Current chains

Chain C

eutP P2

Nearby chains

Chain A

Response regulator

Chain B

Response regulator

Chain F

eutP P2