Motif HL_02817.2 Version HL_02817.2 of this group appears in releases 3.96 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5BTP_003 | 5BTP | 0.3944 | 2 | B | ZMP/ZTP riboswitch | G | 28 | A | 29 | A | 30 | A | 33 | A | 34 | C | 35 | cWW | ncsS |
| 2 | HL_8SYK_002 | 8SYK | 0.0000 | 2 | A | RNA device 43 truncation mutant 3 (U100C) | C | 32 | C | 33 | A | 34 | U | 37 | A | 38 | G | 39 | cWW | |
| 3 | HL_2OEU_002 | 2OEU | 0.1512 | 2 | A | Hammerhead Ribozyme | C | 25 | C | 26 | A | 27 | U | 30 | A | 31 | G | 32 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCAAAUAG | 2 |
| GAAUUAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAAAUA | 2 |
| AAUUAA | 1 |
Release history
| Release | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.15 | Avg 0.21 | Max 0.40
Coloring options: