HL_6XA1_036

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGAUGGCCUCCGUUG

Length

15 nucleotides

Bulged bases

6XA1|1|L5|C|2475, 6XA1|1|L5|C|2476, 6XA1|1|L5|U|2477

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|C|2469
6XA1|1|L5|G|2470
6XA1|1|L5|A|2471
6XA1|1|L5|U|2472
6XA1|1|L5|G|2473
6XA1|1|L5|G|2474
6XA1|1|L5|C|2475
6XA1|1|L5|C|2476
6XA1|1|L5|U|2477
6XA1|1|L5|C|2478
6XA1|1|L5|C|2479
6XA1|1|L5|G|2480
6XA1|1|L5|U|2481
6XA1|1|L5|U|2482
6XA1|1|L5|G|2483

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L23a