HL_6XA1_059
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAGAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XA1_059 not in the Motif Atlas
- Homologous match to HL_5TBW_057
- Geometric discrepancy: 0.1038
- The information below is about HL_5TBW_057
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
6XA1|1|L5|C|4240
6XA1|1|L5|A|4241
6XA1|1|L5|G|4242
6XA1|1|L5|A|4243
6XA1|1|L5|A|4244
6XA1|1|L5|G|4245
6XA1|1|L5|G|4246
6XA1|1|L5|G|4247
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain Bv
- Transfer RNA; tRNA
- Chain LI
- 60S ribosomal protein L10-like
- Chain LT
- 60S ribosomal protein L21
- Chain Lo
- 60S ribosomal protein L36a
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