HL_6XA1_088

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAU(OMC)CAAGG(A2M)AG

Length

12 nucleotides

Bulged bases

6XA1|1|S2|A|464

QA status

Modified nucleotides: OMC, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|S2|C|459
6XA1|1|S2|A|460
6XA1|1|S2|U|461
6XA1|1|S2|OMC|462
6XA1|1|S2|C|463
6XA1|1|S2|A|464
6XA1|1|S2|A|465
6XA1|1|S2|G|466
6XA1|1|S2|G|467
6XA1|1|S2|A2M|468
6XA1|1|S2|A|469
6XA1|1|S2|G|470

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LV

60S ribosomal protein L23

Chain SG

40S ribosomal protein S6