HL_6XE0_009

3D structure

PDB id

6XE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6XE0|1|W|A|344

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XE0_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1523

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

6XE0|1|W|C|342
6XE0|1|W|U|343
6XE0|1|W|A|344
6XE0|1|W|C|345
6XE0|1|W|G|346
6XE0|1|W|G|347

Current chains

Chain W

16s rRNA

Nearby chains