HL_6XIQ_009

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GGUAAAUUCC

Length

10 nucleotides

Bulged bases

6XIQ|1|1|G|304, 6XIQ|1|1|U|305

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|G|303
6XIQ|1|1|G|304
6XIQ|1|1|U|305
6XIQ|1|1|A|306
6XIQ|1|1|A|307
6XIQ|1|1|A|308
6XIQ|1|1|U|309
6XIQ|1|1|U|310
6XIQ|1|1|C|311
6XIQ|1|1|C|312

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain N

60S ribosomal protein L15-A

Chain a

60S ribosomal protein L28

Chain i

60S ribosomal protein L36-A

Chain o

60S ribosomal protein L42-A