HL_6XIQ_012
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GUGUUUUGUAUUUCAC
- Length
- 16 nucleotides
- Bulged bases
- 6XIQ|1|1|U|447, 6XIQ|1|1|U|451, 6XIQ|1|1|A|486, 6XIQ|1|1|U|489, 6XIQ|1|1|A|491
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|443
6XIQ|1|1|U|444
6XIQ|1|1|G|445
6XIQ|1|1|U|446
6XIQ|1|1|U|447
6XIQ|1|1|U|448
6XIQ|1|1|U|449
6XIQ|1|1|G|450
6XIQ|1|1|U|451
6XIQ|1|1|A|486
6XIQ|1|1|U|487
6XIQ|1|1|U|488
6XIQ|1|1|U|489
6XIQ|1|1|C|490
6XIQ|1|1|A|491
6XIQ|1|1|C|492
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain e
- RPL32 isoform 1
Coloring options: