HL_6XIQ_031

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AUGAGAACU

Length

9 nucleotides

Bulged bases

6XIQ|1|1|A|1465, 6XIQ|1|1|A|1468, 6XIQ|1|1|C|1469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|A|1462
6XIQ|1|1|U|1463
6XIQ|1|1|G|1464
6XIQ|1|1|A|1465
6XIQ|1|1|G|1466
6XIQ|1|1|A|1467
6XIQ|1|1|A|1468
6XIQ|1|1|C|1469
6XIQ|1|1|U|1470

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain P

60S ribosomal protein L17-A

Chain R

60S ribosomal protein L19-A

Chain d

60S ribosomal protein L31-A