HL_6XIQ_037
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- AGUUAUCUUUU
- Length
- 11 nucleotides
- Bulged bases
- 6XIQ|1|1|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XIQ_037 not in the Motif Atlas
- Geometric match to HL_5ID6_001
- Geometric discrepancy: 0.1325
- The information below is about HL_5ID6_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
6XIQ|1|1|A|1679
6XIQ|1|1|G|1680
6XIQ|1|1|U|1681
6XIQ|1|1|U|1682
6XIQ|1|1|A|1683
6XIQ|1|1|U|1684
6XIQ|1|1|C|1685
6XIQ|1|1|U|1686
6XIQ|1|1|U|1687
6XIQ|1|1|U|1688
6XIQ|1|1|U|1689
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain U
- 60S ribosomal protein L22-A
Coloring options: