HL_6XIQ_055

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6XIQ|1|1|U|2617, 6XIQ|1|1|G|2618

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|C|2616
6XIQ|1|1|U|2617
6XIQ|1|1|G|2618
6XIQ|1|1|G|2619
6XIQ|1|1|G|2620
6XIQ|1|1|G|2621
6XIQ|1|1|C|2622
6XIQ|1|1|G|2623
6XIQ|1|1|G|2624

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain AZ

Transfer RNA; tRNA

Chain I

RPL10 isoform 1

Chain b

RPL29 isoform 1