HL_6XIQ_078

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

6XIQ|1|2|U|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XIQ_078 not in the Motif Atlas

Geometric match to HL_5U30_001

Geometric discrepancy: 0.1622

The information below is about HL_5U30_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6XIQ|1|2|C|276
6XIQ|1|2|U|277
6XIQ|1|2|U|278
6XIQ|1|2|G|279

Current chains

Chain 2

18S ribosomal RNA

Nearby chains