HL_6XIQ_091

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AUUUUGUUGGUUUCU

Length

15 nucleotides

Bulged bases

6XIQ|1|2|U|833, 6XIQ|1|2|U|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|2|A|829
6XIQ|1|2|U|830
6XIQ|1|2|U|831
6XIQ|1|2|U|832
6XIQ|1|2|U|833
6XIQ|1|2|G|834
6XIQ|1|2|U|835
6XIQ|1|2|U|836
6XIQ|1|2|G|837
6XIQ|1|2|G|838
6XIQ|1|2|U|839
6XIQ|1|2|U|840
6XIQ|1|2|U|841
6XIQ|1|2|C|842
6XIQ|1|2|U|843

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AB

40S ribosomal protein S11-A