HL_6XIR_019
3D structure
- PDB id
- 6XIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGAUGUCUUCGGAUG
- Length
- 16 nucleotides
- Bulged bases
- 6XIR|1|1|C|765, 6XIR|1|1|U|766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIR|1|1|C|758
6XIR|1|1|U|759
6XIR|1|1|G|760
6XIR|1|1|A|761
6XIR|1|1|U|762
6XIR|1|1|G|763
6XIR|1|1|U|764
6XIR|1|1|C|765
6XIR|1|1|U|766
6XIR|1|1|U|767
6XIR|1|1|C|768
6XIR|1|1|G|769
6XIR|1|1|G|770
6XIR|1|1|A|771
6XIR|1|1|U|772
6XIR|1|1|G|773
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13-A
- Chain a
- 60S ribosomal protein L28
- Chain o
- 60S ribosomal protein L42-A
Coloring options: