HL_6XIR_088

3D structure

PDB id

6XIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGGUUGGAACGG

Length

12 nucleotides

Bulged bases

6XIR|1|2|G|651

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIR|1|2|C|646
6XIR|1|2|G|647
6XIR|1|2|G|648
6XIR|1|2|U|649
6XIR|1|2|U|650
6XIR|1|2|G|651
6XIR|1|2|G|652
6XIR|1|2|A|684
6XIR|1|2|A|685
6XIR|1|2|C|686
6XIR|1|2|G|687
6XIR|1|2|G|688

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AM

RPS22A isoform 1

Chain x

40S ribosomal protein S7-A