HL_6XYW_027
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUUGGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 6XYW|1|1|A|1219
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_027 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.3958
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6XYW|1|1|C|1213
6XYW|1|1|U|1214
6XYW|1|1|U|1215
6XYW|1|1|G|1216
6XYW|1|1|G|1217
6XYW|1|1|A|1218
6XYW|1|1|A|1219
6XYW|1|1|G|1220
6XYW|1|1|C|1221
6XYW|1|1|A|1222
6XYW|1|1|G|1223
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Ai
- At4g35490
Coloring options: