HL_6XYW_034

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UUGGA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XYW_034 not in the Motif Atlas

Geometric match to HL_5T16_002

Geometric discrepancy: 0.2998

The information below is about HL_5T16_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

6XYW|1|1|U|1601
6XYW|1|1|U|1602
6XYW|1|1|G|1603
6XYW|1|1|G|1604
6XYW|1|1|A|1605

Current chains

Chain 1

RNA (2842-MER)

Nearby chains