HL_6XYW_046
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GUAACUCUAAC
- Length
- 11 nucleotides
- Bulged bases
- 6XYW|1|1|A|2224
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_046 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.3016
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6XYW|1|1|G|2221
6XYW|1|1|U|2222
6XYW|1|1|A|2223
6XYW|1|1|A|2224
6XYW|1|1|C|2225
6XYW|1|1|U|2226
6XYW|1|1|C|2227
6XYW|1|1|U|2228
6XYW|1|1|A|2229
6XYW|1|1|A|2230
6XYW|1|1|C|2231
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: