HL_6XYW_095
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 6XYW|1|2|C|1711, 6XYW|1|2|U|1713
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_095 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.266
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6XYW|1|2|G|1705
6XYW|1|2|A|1706
6XYW|1|2|U|1707
6XYW|1|2|C|1708
6XYW|1|2|A|1709
6XYW|1|2|G|1710
6XYW|1|2|C|1711
6XYW|1|2|A|1712
6XYW|1|2|U|1713
6XYW|1|2|G|1714
6XYW|1|2|C|1715
Current chains
- Chain 2
- RNA (1743-MER)
Nearby chains
- Chain Bh
- 30S ribosomal protein S9, mitochondrial
- Chain Bi
- 40S ribosomal protein S10, mitochondrial
- Chain Bm
- At2g34520
- Chain Br
- 40S ribosomal protein S19, mitochondrial
- Chain Bt
- 30S ribosomal protein S31, mitochondrial
- Chain Bx
- 37S ribosomal protein S27
Coloring options: