HL_6XZ7_042

3D structure

PDB id

6XZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6XZ7|1|A|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XZ7_042 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.0715

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

6XZ7|1|A|C|1691
6XZ7|1|A|U|1692
6XZ7|1|A|U|1693
6XZ7|1|A|C|1694
6XZ7|1|A|G|1695
6XZ7|1|A|G|1696

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2