HL_6XZA_023

3D structure

PDB id

6XZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CCUUCGG

Length

7 nucleotides

Bulged bases

6XZA|1|A1|U|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XZA_023 not in the Motif Atlas

Geometric match to HL_7A0S_011

Geometric discrepancy: 0.3064

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6XZA|1|A1|C|1027
6XZA|1|A1|C|1028
6XZA|1|A1|U|1029
6XZA|1|A1|U|1030
6XZA|1|A1|C|1031
6XZA|1|A1|G|1032
6XZA|1|A1|G|1033

Current chains

Chain A1

16S rRNA

Nearby chains