6XZA Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
HL_6XZA_001 | 1/A1/12:22 | No text annotation | homologous HL_5J7L_001 NA | |
HL_6XZA_003 | 1/A1/158:163 | GNRA | homologous HL_5J7L_003 NA | |
HL_6XZA_007 | 1/A1/296:301 | GNRA | homologous HL_5J7L_007 NA | |
HL_6XZA_008 | 1/A1/320:333 | No text annotation | homologous HL_5J7L_008 NA | |
HL_6XZA_009 | 1/A1/342:347 | UNCG | homologous HL_4LFB_009 HL_61337.1 | |
HL_6XZA_015 | 1/A1/689:698 | No text annotation | homologous HL_5J7L_015 NA | |
HL_6XZA_016 | 1/A1/726:731 | GNRA | homologous HL_5J7L_016 NA | |
HL_6XZA_017 | 1/A1/786:796 | No text annotation | homologous HL_5J7L_017 NA | |
HL_6XZA_019 | 1/A1/862:867 | GNRA | homologous HL_4LFB_019 HL_34789.1 | |
HL_6XZA_020 | 1/A1/897:902 | GNRA | homologous HL_4LFB_020 HL_34789.1 | |
HL_6XZA_022 | 1/A1/1012:1017 | GNRA | homologous HL_4LFB_022 HL_34789.1 | |
HL_6XZA_024 | 1/A1/1076:1081 | GNRA | homologous HL_4LFB_024 HL_34789.1 | |
HL_6XZA_025 | 1/A1/1089:1096 | T-loop related | homologous HL_4LFB_025 HL_63894.1 | |
HL_6XZA_026 | 1/A1/1134:1140 | No text annotation | homologous HL_4LFB_026 HL_92935.1 | |
HL_6XZA_027 | 1/A1/1165:1171 | GNRA | homologous HL_5J7L_026 NA | |
HL_6XZA_028 | 1/A1/1265:1270 | GNRA | homologous HL_4LFB_028 HL_34789.1 | |
HL_6XZA_029 | 1/A1/1314:1323 | T-loop with 3 stacked bulged bases | homologous HL_5J7L_028 NA | |
HL_6XZA_030 | 1/A1/1356:1366 | No text annotation | homologous HL_5J7L_029 NA | |
HL_6XZA_031 | 1/A1/1449:1454 | UNCG | homologous HL_4LFB_031 HL_61337.1 | |
HL_6XZA_033 | 1/A2/59:68 | No text annotation | homologous HL_5J7L_134 NA | |
HL_6XZA_034 | 1/A2/87:95 | No text annotation | homologous HL_5J7L_135 NA | |
HL_6XZA_035 | 1/A2/123:128 | No text annotation | homologous HL_5J7L_136 NA | |
HL_6XZA_036 | 1/A2/137:142 | UNCG | geometric HL_4AY2_001 NA | |
HL_6XZA_037 | 1/A2/158:168 | No text annotation | homologous HL_5J7L_138 NA | |
HL_6XZA_038 | 1/A2/194:201 | No text annotation | homologous HL_5J7L_139 NA | |
HL_6XZA_039 | 1/A2/225:230 | No text annotation | homologous HL_5J7L_140 NA | |
HL_6XZA_040 | 1/A2/246:252 | No text annotation | homologous HL_5J7L_141 NA | |
HL_6XZA_041 | 1/A2/305:312 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_142 NA | |
HL_6XZA_042 | 1/A2/319:323 | No text annotation | homologous HL_7RQB_011 NA | |
HL_6XZA_043 | 1/A2/327:335 | T-loop with unstacked turn | homologous HL_5J7L_144 NA | |
HL_6XZA_044 | 1/A2/382:392 | No text annotation | homologous HL_5J7L_145 NA | |
HL_6XZA_045 | 1/A2/410:417 | Pseudoknot geometry | homologous HL_5J7L_146 NA | |
HL_6XZA_046 | 1/A2/462:467 | GNRA | homologous HL_7RQB_015 NA | |
HL_6XZA_047 | 1/A2/487:493 | GNRA | homologous HL_5J7L_148 NA | |
HL_6XZA_048 | 1/A2/543:550 | No text annotation | homologous HL_5J7L_149 NA | |
HL_6XZA_049 | 1/A2/566:575 | T-loop with 2 stacked bulged bases | geometric HL_5J7L_150 NA | |
HL_6XZA_050 | 1/A2/611:617 | No text annotation | homologous HL_5J7L_151 NA | |
HL_6XZA_051 | 1/A2/629:634 | GNRA | homologous HL_5J7L_152 NA | |
HL_6XZA_052 | 1/A2/641:647 | No text annotation | homologous HL_5J7L_153 NA | |
HL_6XZA_053 | 1/A2/712:719 | GNRA wlth tandem sheared | homologous HL_5J7L_154 NA | |
HL_6XZA_054 | 1/A2/744:753 | No text annotation | homologous HL_5J7L_155 NA | |
HL_6XZA_055 | 1/A2/779:785 | No text annotation | homologous HL_7RQB_024 NA | |
HL_6XZA_056 | 1/A2/826:831 | No text annotation | homologous HL_7RQB_025 NA | |
HL_6XZA_108 | 1/A2/955:962 | GNRA | homologous HL_5J7L_211 NA | |
HL_6XZA_059 | 1/A2/978:985 | No text annotation | homologous HL_5J7L_160 NA | |
HL_6XZA_063 | 1/A2/1222:1227 | GNRA | homologous HL_5J7L_164 NA | |
HL_6XZA_064 | 1/A2/1281:1289 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_165 NA | |
HL_6XZA_065 | 1/A2/1324:1330 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_166 NA | |
HL_6XZA_066 | 1/A2/1363:1368 | GNRA | homologous HL_5J7L_167 NA | |
HL_6XZA_067 | 1/A2/1389:1398 | No text annotation | homologous HL_5J7L_168 NA | |
HL_6XZA_068 | 1/A2/1451:1459 | Mini UNCG with extended bulge | homologous HL_5J7L_169 NA | |
HL_6XZA_069 | 1/A2/1492:1498 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_170 NA | |
HL_6XZA_070 | 1/A2/1533:1538 | UNCG | homologous HL_5J7L_171 NA | |
HL_6XZA_071 | 1/A2/1565:1568 | No text annotation | homologous HL_7RQB_039 NA | |
HL_6XZA_072 | 1/A2/1612:1619 | No text annotation | homologous HL_5J7L_173 NA | |
HL_6XZA_073 | 1/A2/1630:1636 | GNRA | homologous HL_5J7L_174 NA | |
HL_6XZA_074 | 1/A2/1691:1696 | No text annotation | homologous HL_7RQB_042 NA | |
HL_6XZA_075 | 1/A2/1728:1731 | No text annotation | geometric HL_5J7L_176 NA | |
HL_6XZA_076 | 1/A2/1752:1756 | No text annotation | homologous HL_5J7L_177 NA | |
HL_6XZA_077 | 1/A2/1777:1787 | No text annotation | homologous HL_5J7L_178 NA | |
HL_6XZA_078 | 1/A2/1806:1811 | GNRA related | homologous HL_5J7L_179 NA | |
HL_6XZA_079 | 1/A2/1868:1873 | GNRA | geometric HL_6LAX_002 HL_34789.1 | |
HL_6XZA_080 | 1/A2/1910:1920 | No text annotation | homologous HL_5J7L_181 NA | |
HL_6XZA_081 | 1/A2/1949:1957 | No text annotation | homologous HL_5J7L_182 NA | |
HL_6XZA_082 | 1/A2/2027:2036 | No text annotation | homologous HL_5J7L_183 NA | |
HL_6XZA_084 | 1/A2/2209:2215 | No text annotation | homologous HL_5J7L_185 NA | |
HL_6XZA_085 | 1/A2/2248:2256 | No text annotation | homologous HL_7RQB_053 NA | |
HL_6XZA_086 | 1/A2/2264:2276 | No text annotation | homologous HL_5J7L_187 NA | |
HL_6XZA_110 | 1/A2/2304:2312 | No text annotation | homologous HL_5J7L_219 NA | |
HL_6XZA_088 | 1/A2/2324:2331 | Pseudoknot geometry | homologous HL_5J7L_189 NA | |
HL_6XZA_089 | 1/A2/2356:2361 | GNRA | homologous HL_5J7L_190 NA | |
HL_6XZA_090 | 1/A2/2374:2379 | GNRA | homologous HL_5J7L_191 NA | |
HL_6XZA_091 | 1/A2/2404:2413 | No text annotation | homologous HL_5J7L_192 NA | |
HL_6XZA_092 | 1/A2/2471:2479 | No text annotation | homologous HL_7RQB_060 NA | |
HL_6XZA_093 | 1/A2/2528:2535 | GNRA variation | homologous HL_5J7L_194 NA | |
HL_6XZA_094 | 1/A2/2551:2557 | No text annotation | homologous HL_5J7L_195 NA | |
HL_6XZA_095 | 1/A2/2594:2599 | GNRA | homologous HL_5J7L_196 NA | |
HL_6XZA_096 | 1/A2/2658:2663 | GNRA | homologous HL_5J7L_197 NA | |
HL_6XZA_097 | 1/A2/2701:2706 | Ribsomal LSU H95 | homologous HL_5J7L_198 NA | |
HL_6XZA_098 | 1/A2/2745:2759 | No text annotation | homologous HL_5J7L_199 NA | |
HL_6XZA_099 | 1/A2/2795:2801 | UNCG variation | homologous HL_5J7L_200 NA | |
HL_6XZA_100 | 1/A2/2819:2827 | No text annotation | homologous HL_5J7L_201 NA | |
HL_6XZA_101 | 1/A2/2856:2861 | GNRA | homologous HL_5J7L_202 NA | |
HL_6XZA_109 | 1/B2/34:48 | No text annotation | homologous HL_5J7L_215 NA | |
HL_6XZA_102 | 1/B2/38:44 | No text annotation | homologous HL_5J7L_203 NA | |
HL_6XZA_103 | 1/B2/86:90 | Mini UNCG | homologous HL_5J7L_204 NA | |
HL_6XZA_104 | 1/f2/13:22 | No text annotation | homologous HL_6PMO_003 NA | |
HL_6XZA_105 | 1/f2/31:39 | tRNA anticodon loop | homologous HL_6CFJ_107 HL_81376.1 | |
HL_6XZA_106 | 1/f2/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6CFJ_108 HL_33597.1 |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
HL_6XZA_002 | No text annotation | ||
HL_6XZA_004 | GNRA | ||
HL_6XZA_107 | No text annotation | ||
HL_6XZA_005 | No text annotation | ||
HL_6XZA_006 | GNRA related | ||
HL_6XZA_010 | GNRA | ||
HL_6XZA_011 | UNCG | ||
HL_6XZA_012 | GNRA wlth extra near cWW | ||
HL_6XZA_013 | No text annotation | ||
HL_6XZA_014 | GNRA-like with tWH | ||
HL_6XZA_018 | Externally structured | ||
HL_6XZA_021 | No text annotation | ||
HL_6XZA_023 | No text annotation | ||
HL_6XZA_032 | GNRA | ||
HL_6XZA_057 | No text annotation | ||
HL_6XZA_058 | No text annotation | ||
HL_6XZA_060 | No text annotation | ||
HL_6XZA_061 | GNRA wlth tandem sheared | ||
HL_6XZA_062 | No text annotation | ||
HL_6XZA_083 | No text annotation | ||
HL_6XZA_087 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
IL_6XZA_001 | 1/A1/30:32, 1/A1/552:553 | Single bulged G | homologous IL_5J7L_001 NA | |
IL_6XZA_003 | 1/A1/47:52, 1/A1/359:361 | No text annotation | homologous IL_5J7L_003 NA | |
IL_6XZA_005 | 1/A1/63:66, 1/A1/103:104 | Multiple bulged bases | homologous IL_5J7L_005 NA | |
IL_6XZA_006 | 1/A1/67:69, 1/A1/99:102 | Minor groove platform with extra cWW | homologous IL_5J7L_006 NA | |
IL_6XZA_009 | 1/A1/128:131, 1/A1/231:233 | Isolated non-canonical cWW pair | homologous IL_5J7L_009 NA | |
IL_6XZA_010 | 1/A1/132:136, 1/A1/227:230 | Minor groove platform related | homologous IL_5J7L_010 NA | |
IL_6XZA_011 | 1/A1/144:146, 1/A1/176:178 | Isolated cWH basepair | homologous IL_5J7L_011 NA | |
IL_6XZA_012 | 1/A1/147:153, 1/A1/168:175 | tWH-tWH-tHW-tHW | homologous IL_5J7L_012 NA | |
IL_6XZA_014 | 1/A1/242:247, 1/A1/277:284 | Kink-turn with non-sequential stacking | homologous IL_5J7L_014 NA | |
IL_6XZA_016 | 1/A1/292:293, 1/A1/304:308 | C-loop | homologous IL_4LFB_013 IL_06671.1 | |
IL_6XZA_024 | 1/A1/504:511, 1/A1/540:541 | SSU/LSU pseudoknot | homologous IL_4LFB_020 IL_11411.1 | |
IL_6XZA_026 | 1/A1/569:575, 1/A1/880:881 | No text annotation | homologous IL_5J7L_026 NA | |
IL_6XZA_027 | 1/A1/580:584, 1/A1/757:761 | tSH-tHW-tHS | homologous IL_5J7L_027 NA | |
IL_6XZA_028 | 1/A1/594:596, 1/A1/644:645 | Major groove platform | homologous IL_5J7L_028 NA | |
IL_6XZA_029 | 1/A1/597:598, 1/A1/640:643 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_029 NA | |
IL_6XZA_030 | 1/A1/605:612, 1/A1/628:633 | No text annotation | homologous IL_5J7L_030 NA | |
IL_6XZA_031 | 1/A1/654:655, 1/A1/751:754 | Major groove platform; stack outside cWW | homologous IL_4LFB_027 IL_74641.1 | |
IL_6XZA_032 | 1/A1/658:659, 1/A1/746:748 | Single stack bend | homologous IL_5J7L_032 NA | |
IL_6XZA_180 | 1/A1/659:660, 1/A1/745:747 | Single stack bend | homologous IL_5J7L_032 NA | |
IL_6XZA_033 | 1/A1/662:666, 1/A1/740:743 | Tandem non-canonical cWW pairs | homologous IL_5J7L_033 NA | |
IL_6XZA_181 | 1/A1/673:677, 1/A1/713:717 | Triple non-canonical cWW pairs | homologous IL_5J7L_361 NA | |
IL_6XZA_035 | 1/A1/684:688, 1/A1/699:706 | Kink-turn | homologous IL_5J7L_035 NA | |
IL_6XZA_036 | 1/A1/774:778, 1/A1/804:805 | Left turn | homologous IL_4LFB_032 IL_29346.3 | |
IL_6XZA_037 | 1/A1/779:783, 1/A1/799:803 | tSH-tHW-tHS | homologous IL_4LFB_033 IL_05821.1 | |
IL_6XZA_038 | 1/A1/887:894, 1/A1/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_5J7L_038 NA | |
IL_6XZA_039 | 1/A1/922:923, 1/A1/1393:1395 | Single bulged A | homologous IL_5J7L_039 NA | |
IL_6XZA_040 | 1/A1/925:927, 1/A1/1390:1391 | Single bulged G | homologous IL_5J7L_040 NA | |
IL_6XZA_041 | 1/A1/933:935, 1/A1/1380:1384 | Minor groove platform | homologous IL_5J7L_041 NA | |
IL_6XZA_042 | 1/A1/953:954, 1/A1/1226:1228 | Minor groove platform | homologous IL_4LFB_038 IL_34520.1 | |
IL_6XZA_043 | 1/A1/993:997, 1/A1/1044:1045 | Minor groove platform | homologous IL_5J7L_043 NA | |
IL_6XZA_182 | 1/A1/997:999, 1/A1/1041:1044 | No text annotation | geometric IL_8C3A_070 NA | |
IL_6XZA_044 | 1/A1/998:999, 1/A1/1041:1043 | Single stack bend | homologous IL_5J7L_044 NA | |
IL_6XZA_045 | 1/A1/1048:1050, 1/A1/1208:1209 | Single bulged U | geometric IL_5J7L_046 NA | |
IL_6XZA_047 | 1/A1/1052:1056, 1/A1/1204:1206 | Isolated cWS basepair | geometric IL_4LFB_044 IL_82453.1 | |
IL_6XZA_048 | 1/A1/1057:1058, 1/A1/1199:1203 | Minor groove platform | homologous IL_5J7L_048 NA | |
IL_6XZA_049 | 1/A1/1060:1061, 1/A1/1195:1197 | Single bulged A | geometric IL_5J7L_049 NA | |
IL_6XZA_050 | 1/A1/1061:1063, 1/A1/1193:1195 | Isolated non-canonical cWW pair | homologous IL_5J7L_050 NA | |
IL_6XZA_051 | 1/A1/1124:1128, 1/A1/1144:1149 | No text annotation | homologous IL_5J7L_051 NA | |
IL_6XZA_052 | 1/A1/1129:1132, 1/A1/1142:1143 | Minor groove platform | homologous IL_5J7L_052 NA | |
IL_6XZA_053 | 1/A1/1158:1161, 1/A1/1175:1181 | No text annotation | homologous IL_5J7L_053 NA | |
IL_6XZA_054 | 1/A1/1247:1253, 1/A1/1284:1290 | No text annotation | homologous IL_5J7L_054 NA | |
IL_6XZA_055 | 1/A1/1255:1258, 1/A1/1277:1282 | 180 degree turn | homologous IL_5J7L_055 NA | |
IL_6XZA_056 | 1/A1/1259:1263, 1/A1/1272:1276 | Double sheared with non-canonical cWW | homologous IL_5J7L_056 NA | |
IL_6XZA_057 | 1/A1/1303:1308, 1/A1/1329:1334 | No text annotation | homologous IL_5J7L_057 NA | |
IL_6XZA_058 | 1/A1/1399:1401, 1/A1/1501:1504 | No text annotation | homologous IL_5J7L_058 NA | |
IL_6XZA_061 | 1/A1/1412:1414, 1/A1/1486:1488 | Isolated non-canonical cWW pair | homologous IL_5J7L_061 NA | |
IL_6XZA_062 | 1/A1/1416:1419, 1/A1/1481:1484 | Double sheared | homologous IL_5J7L_062 NA | |
IL_6XZA_063 | 1/A1/1430:1435, 1/A1/1466:1470 | Triple sheared related | homologous IL_5J7L_063 NA | |
IL_6XZA_064 | 1/A1/1440:1442, 1/A1/1460:1461 | Single bulged A | homologous IL_5J7L_064 NA | |
IL_6XZA_065 | 1/A1/1445:1448, 1/A1/1455:1457 | No text annotation | homologous IL_5J7L_065 NA | |
IL_6XZA_066 | 1/A2/24:30, 1/A2/510:516 | Triple sheared with non-canonical cWW | geometric IL_5J7L_245 NA | |
IL_6XZA_067 | 1/A2/36:37, 1/A2/442:444 | Single bulged A | homologous IL_7RQB_002 NA | |
IL_6XZA_068 | 1/A2/43:44, 1/A2/434:436 | Minor groove platform | homologous IL_5J7L_247 NA | |
IL_6XZA_069 | 1/A2/81:85, 1/A2/97:105 | No text annotation | homologous IL_5J7L_248 NA | |
IL_6XZA_070 | 1/A2/183:184, 1/A2/212:214 | Single stack bend | homologous IL_5J7L_249 NA | |
IL_6XZA_071 | 1/A2/188:194, 1/A2/201:208 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5J7L_250 NA | |
IL_6XZA_072 | 1/A2/239:245, 1/A2/253:258 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5J7L_251 NA | |
IL_6XZA_073 | 1/A2/269:271, 1/A2/366:370 | No text annotation | homologous IL_5J7L_252 NA | |
IL_6XZA_075 | 1/A2/293:295, 1/A2/343:347 | No text annotation | homologous IL_5J7L_254 NA | |
IL_6XZA_076 | 1/A2/481:484, 1/A2/496:509 | No text annotation | homologous IL_5J7L_255 NA | |
IL_6XZA_077 | 1/A2/536:539, 1/A2/554:557 | Double sheared | homologous IL_5J7L_256 NA | |
IL_6XZA_078 | 1/A2/564:566, 1/A2/575:577 | Isolated non-canonical cWW pair | homologous IL_5J7L_257 NA | |
IL_6XZA_079 | 1/A2/606:610, 1/A2/618:622 | AAA cross-strand stack | homologous IL_5J7L_258 NA | |
IL_6XZA_080 | 1/A2/672:674, 1/A2/806:808 | No text annotation | homologous IL_7RQB_017 NA | |
IL_6XZA_081 | 1/A2/674:678, 1/A2/799:806 | tHW-tHW cross-strand stack | geometric IL_5J7L_260 NA | |
IL_6XZA_082 | 1/A2/697:698, 1/A2/763:765 | Single bulged A | geometric IL_5J7L_261 NA | |
IL_6XZA_083 | 1/A2/702:703, 1/A2/728:730 | Single bulged G | homologous IL_5J7L_262 NA | |
IL_6XZA_084 | 1/A2/703:707, 1/A2/724:728 | Triple sheared | geometric IL_7RQB_021 NA | |
IL_6XZA_085 | 1/A2/738:740, 1/A2/757:758 | Major groove platform | homologous IL_5J7L_264 NA | |
IL_6XZA_086 | 1/A2/775:777, 1/A2/787:791 | Multiple bulged bases | geometric IL_5J7L_265 NA | |
IL_6XZA_087 | 1/A2/844:847, 1/A2/933:934 | 90 degree turn | homologous IL_5J7L_267 NA | |
IL_6XZA_184 | 1/A2/844:848, 1/A2/930:934 | No text annotation | geometric IL_5J7L_399 NA | |
IL_6XZA_088 | 1/A2/847:848, 1/A2/930:933 | Stack outside cWW | homologous IL_5J7L_268 NA | |
IL_6XZA_089 | 1/A2/850:851, 1/A2/926:928 | Single stack bend | homologous IL_5J7L_269 NA | |
IL_6XZA_090 | 1/A2/856:862, 1/A2/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_5J7L_270 NA | |
IL_6XZA_091 | 1/A2/862:863, 1/A2/913:915 | Single bulged G | homologous IL_5J7L_271 NA | |
IL_6XZA_092 | 1/A2/864:868, 1/A2/909:912 | C-loop with bulged stacked A's | homologous IL_5J7L_272 NA | |
IL_6XZA_093 | 1/A2/870:872, 1/A2/905:907 | Isolated non-canonical cWW pair | homologous IL_5J7L_273 NA | |
IL_6XZA_094 | 1/A2/875:879, 1/A2/898:902 | Double sheared with non-canonical cWW | homologous IL_5J7L_274 NA | |
IL_6XZA_095 | 1/A2/994:996, 1/A2/1159:1160 | Single bulged C | homologous IL_5J7L_276 NA | |
IL_6XZA_096 | 1/A2/998:1002, 1/A2/1153:1157 | UAA/GAN | homologous IL_4WF9_036 IL_08938.1 | |
IL_6XZA_097 | 1/A2/1004:1011, 1/A2/1150:1151 | SSU/LSU pseudoknot | homologous IL_5J7L_278 NA | |
IL_6XZA_098 | 1/A2/1011:1013, 1/A2/1149:1150 | Single bulged U | geometric IL_5J7L_279 NA | |
IL_6XZA_099 | 1/A2/1018:1024, 1/A2/1140:1144 | Kink-turn related | geometric IL_5J7L_280 NA | |
IL_6XZA_100 | 1/A2/1024:1030, 1/A2/1124:1140 | No text annotation | geometric IL_5J7L_281 NA | |
IL_6XZA_101 | 1/A2/1031:1034, 1/A2/1121:1123 | Isolated non-canonical cWW pair | homologous IL_7RQB_041 NA | |
IL_6XZA_102 | 1/A2/1038:1041, 1/A2/1114:1117 | Tandem non-canonical cWW pairs | homologous IL_5J7L_283 NA | |
IL_6XZA_103 | 1/A2/1043:1051, 1/A2/1108:1112 | Kink-turn | homologous IL_5J7L_284 NA | |
IL_6XZA_106 | 1/A2/1196:1198, 1/A2/1247:1250 | Isolated cWS basepair | homologous IL_5J7L_286 NA | |
IL_6XZA_107 | 1/A2/1202:1206, 1/A2/1240:1243 | No text annotation | homologous IL_5J7L_287 NA | |
IL_6XZA_108 | 1/A2/1208:1215, 1/A2/1234:1238 | Kink-turn | homologous IL_5J7L_288 NA | |
IL_6XZA_109 | 1/A2/1262:1269, 1/A2/2011:2017 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_289 NA | |
IL_6XZA_110 | 1/A2/1310:1313, 1/A2/1603:1604 | Major groove platform; stack outside cWW | homologous IL_5J7L_290 NA | |
IL_6XZA_111 | 1/A2/1319:1323, 1/A2/1331:1333 | C-loop | homologous IL_5J7L_291 NA | |
IL_6XZA_112 | 1/A2/1351:1355, 1/A2/1376:1380 | UAA/GAN | homologous IL_5J7L_292 NA | |
IL_6XZA_113 | 1/A2/1357:1361, 1/A2/1370:1374 | tSH-tHW-tHS | homologous IL_5J7L_293 NA | |
IL_6XZA_114 | 1/A2/1415:1416, 1/A2/1582:1587 | No text annotation | homologous IL_5J7L_294 NA | |
IL_6XZA_115 | 1/A2/1417:1421, 1/A2/1577:1581 | UAA/GAN | homologous IL_5J7L_295 NA | |
IL_6XZA_116 | 1/A2/1432:1435, 1/A2/1557:1561 | Tandem non-canonical cWW pairs | homologous IL_5J7L_296 NA | |
IL_6XZA_117 | 1/A2/1437:1440, 1/A2/1551:1555 | tSH-tHW | homologous IL_5J7L_297 NA | |
IL_6XZA_118 | 1/A2/1450:1451, 1/A2/1459:1461 | Single bulged U | geometric IL_5J7L_298 NA | |
IL_6XZA_119 | 1/A2/1468:1471, 1/A2/1520:1524 | No text annotation | homologous IL_5J7L_299 NA | |
IL_6XZA_120 | 1/A2/1474:1478, 1/A2/1513:1517 | tSH-tHW-tHS | homologous IL_5J7L_300 NA | |
IL_6XZA_121 | 1/A2/1481:1482, 1/A2/1507:1510 | 180 degree turn | homologous IL_5J7L_301 NA | |
IL_6XZA_122 | 1/A2/1489:1491, 1/A2/1499:1500 | Single bulged A | homologous IL_5J7L_302 NA | |
IL_6XZA_123 | 1/A2/1526:1529, 1/A2/1542:1546 | UAA/GAN variation | homologous IL_5J7L_303 NA | |
IL_6XZA_124 | 1/A2/1651:1656, 1/A2/2004:2006 | No text annotation | homologous IL_5J7L_304 NA | |
IL_6XZA_125 | 1/A2/1663:1665, 1/A2/1995:1997 | Isolated tWW turn | homologous IL_5J7L_305 NA | |
IL_6XZA_126 | 1/A2/1666:1669, 1/A2/1993:1994 | Major groove platform; stack outside cWW | geometric IL_5J7L_306 NA | |
IL_6XZA_186 | 1/A2/1666:1674, 1/A2/1990:1994 | No text annotation | homologous IL_5J7L_386 NA | |
IL_6XZA_127 | 1/A2/1669:1674, 1/A2/1990:1993 | Intercalated tWH | homologous IL_5J7L_307 NA | |
IL_6XZA_128 | 1/A2/1686:1691, 1/A2/1696:1702 | tSH-tSH-tHH-tHS | geometric IL_5J7L_308 NA | |
IL_6XZA_129 | 1/A2/1712:1718, 1/A2/1742:1746 | 6x5 Sarcin-Ricin; G-bulge | homologous IL_5J7L_309 NA | |
IL_6XZA_130 | 1/A2/1720:1724, 1/A2/1736:1740 | Triple sheared | homologous IL_5J7L_310 NA | |
IL_6XZA_131 | 1/A2/1727:1728, 1/A2/1731:1733 | Single bulged C | homologous IL_5J7L_311 NA | |
IL_6XZA_132 | 1/A2/1770:1771, 1/A2/1980:1982 | Single bulged A | homologous IL_5J7L_312 NA | |
IL_6XZA_133 | 1/A2/1798:1804, 1/A2/1813:1821 | Kink-turn related | homologous IL_5J7L_313 NA | |
IL_6XZA_134 | 1/A2/1837:1840, 1/A2/1902:1903 | Minor groove platform, major groove intercalation | homologous IL_5J7L_314 NA | |
IL_6XZA_135 | 1/A2/1841:1842, 1/A2/1898:1901 | Major groove intercalation | homologous IL_5J7L_315 NA | |
IL_6XZA_136 | 1/A2/1846:1849, 1/A2/1893:1894 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_316 NA | |
IL_6XZA_187 | 1/A2/1851:1860, 1/A2/1882:1891 | No text annotation | homologous IL_5J7L_387 NA | |
IL_6XZA_137 | 1/A2/1864:1867, 1/A2/1874:1878 | UAA/GAN related | homologous IL_5J7L_317 NA | |
IL_6XZA_138 | 1/A2/1933:1934, 1/A2/1964:1967 | Bulged stacked bases | homologous IL_5J7L_318 NA | |
IL_6XZA_139 | 1/A2/1934:1945, 1/A2/1961:1964 | No text annotation | geometric IL_7A0S_072 IL_04332.3 | |
IL_6XZA_140 | 1/A2/2050:2052, 1/A2/2617:2618 | Major groove platform | homologous IL_5J7L_320 NA | |
IL_6XZA_141 | 1/A2/2054:2056, 1/A2/2612:2615 | No text annotation | homologous IL_5J7L_321 NA | |
IL_6XZA_188 | 1/A2/2067:2069, 1/A2/2442:2443 | Single bulged U | homologous IL_7A0S_075 IL_97561.1 | |
IL_6XZA_144 | 1/A2/2070:2071, 1/A2/2438:2441 | Minor groove platform | homologous IL_7RQB_081 NA | |
IL_6XZA_145 | 1/A2/2081:2083, 1/A2/2236:2239 | Isolated tHS basepair with bulges | homologous IL_5J7L_325 NA | |
IL_6XZA_146 | 1/A2/2085:2087, 1/A2/2232:2234 | Isolated non-canonical cWW pair | homologous IL_5J7L_326 NA | |
IL_6XZA_151 | 1/A2/2202:2204, 1/A2/2220:2221 | Single bulged U | homologous IL_5J7L_331 NA | |
IL_6XZA_152 | 1/A2/2297:2299, 1/A2/2317:2321 | No text annotation | geometric IL_5J7L_332 NA | |
IL_6XZA_153 | 1/A2/2350:2353, 1/A2/2364:2367 | Double sheared | homologous IL_5J7L_333 NA | |
IL_6XZA_154 | 1/A2/2401:2403, 1/A2/2414:2415 | Single bulged U | homologous IL_5J7L_334 NA | |
IL_6XZA_191 | 1/A2/2453:2454, 1/A2/2498:2500 | Single stack bend | homologous IL_5J7L_391 NA | |
IL_6XZA_192 | 1/A2/2454:2455, 1/A2/2496:2498 | Major groove platform | homologous IL_9DFE_092 IL_48076.7 | |
IL_6XZA_193 | 1/A2/2457:2459, 1/A2/2493:2494 | Major groove platform | homologous IL_5J7L_393 NA | |
IL_6XZA_157 | 1/A2/2459:2461, 1/A2/2489:2493 | Major groove minor groove platform with extra cWW | geometric IL_5J7L_337 NA | |
IL_6XZA_158 | 1/A2/2466:2470, 1/A2/2480:2484 | Double sheared with non-canonical cWW | homologous IL_5J7L_338 NA | |
IL_6XZA_194 | 1/A2/2507:2508, 1/A2/2580:2582 | Major groove platform | homologous IL_5J7L_394 NA | |
IL_6XZA_160 | 1/A2/2510:2512, 1/A2/2574:2578 | Isolated non-canonical cWW with bulges | homologous IL_5J7L_340 NA | |
IL_6XZA_161 | 1/A2/2512:2513, 1/A2/2571:2574 | No text annotation | geometric IL_5J7L_341 NA | |
IL_6XZA_162 | 1/A2/2522:2523, 1/A2/2540:2543 | Major groove platform with intercalation | homologous IL_5J7L_342 NA | |
IL_6XZA_164 | 1/A2/2591:2592, 1/A2/2601:2603 | Single bulged A | homologous IL_7RQB_101 NA | |
IL_6XZA_165 | 1/A2/2636:2640, 1/A2/2774:2782 | tSH-tHS-tHW | homologous IL_5J7L_345 NA | |
IL_6XZA_166 | 1/A2/2652:2658, 1/A2/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge | geometric IL_5J7L_346 NA | |
IL_6XZA_167 | 1/A2/2680:2684, 1/A2/2725:2727 | C-loop | homologous IL_5J7L_347 NA | |
IL_6XZA_168 | 1/A2/2687:2691, 1/A2/2718:2722 | UAA/GAN related, with intercalation | homologous IL_5J7L_348 NA | |
IL_6XZA_169 | 1/A2/2695:2696, 1/A2/2711:2714 | Multiple bulged bases | homologous IL_5J7L_349 NA | |
IL_6XZA_170 | 1/A2/2737:2742, 1/A2/2762:2767 | UAA/GAN with extra cWW | homologous IL_5J7L_350 NA | |
IL_6XZA_171 | 1/A2/2806:2811, 1/A2/2889:2892 | No text annotation | geometric IL_5J7L_351 NA | |
IL_6XZA_172 | 1/A2/2838:2839, 1/A2/2878:2880 | Major groove intercalation | homologous IL_5J7L_352 NA | |
IL_6XZA_173 | 1/A2/2843:2846, 1/A2/2870:2874 | Multiple bulged bases with non-canonical cWW | homologous IL_5J7L_353 NA | |
IL_6XZA_174 | 1/A2/2847:2852, 1/A2/2865:2869 | tHS double platform | homologous IL_5J7L_354 NA | |
IL_6XZA_175 | 1/B2/17:18, 1/B2/65:67 | Major groove intercalation | homologous IL_5J7L_355 NA | |
IL_6XZA_176 | 1/B2/23:28, 1/B2/56:60 | No text annotation | homologous IL_5J7L_356 NA | |
IL_6XZA_177 | 1/B2/30:31, 1/B2/51:54 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 NA | |
IL_6XZA_178 | 1/B2/34:38, 1/B2/44:48 | Symmetric double minor groove platform | geometric IL_5J7L_358 NA | |
IL_6XZA_179 | 1/B2/71:79, 1/B2/97:105 | Bacterial 5S Loop E | homologous IL_5J7L_359 NA |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
IL_6XZA_002 | Single bulged A | ||
IL_6XZA_004 | Minor groove platform | ||
IL_6XZA_007 | Minor groove platform | ||
IL_6XZA_008 | Major groove intercalation | ||
IL_6XZA_013 | No text annotation | ||
IL_6XZA_015 | No text annotation | ||
IL_6XZA_017 | Single bulged U | ||
IL_6XZA_018 | C-loop | ||
IL_6XZA_019 | Single bulged G | ||
IL_6XZA_020 | No text annotation | ||
IL_6XZA_021 | No text annotation | ||
IL_6XZA_022 | tSH-tHW-tWW | ||
IL_6XZA_023 | No text annotation | ||
IL_6XZA_025 | Kink-turn related | ||
IL_6XZA_034 | No text annotation | ||
IL_6XZA_183 | No text annotation | ||
IL_6XZA_046 | No text annotation | ||
IL_6XZA_059 | No text annotation | ||
IL_6XZA_060 | No text annotation | ||
IL_6XZA_074 | No text annotation | ||
IL_6XZA_104 | No text annotation | ||
IL_6XZA_185 | Major groove platform | ||
IL_6XZA_105 | No text annotation | ||
IL_6XZA_142 | No text annotation | ||
IL_6XZA_143 | Isolated non-canonical cWW pair | ||
IL_6XZA_147 | No text annotation | ||
IL_6XZA_189 | No text annotation | ||
IL_6XZA_195 | No text annotation | ||
IL_6XZA_148 | No text annotation | ||
IL_6XZA_190 | Kink-turn | ||
IL_6XZA_149 | Kink-turn related | ||
IL_6XZA_150 | Kink-turn | ||
IL_6XZA_155 | No text annotation | ||
IL_6XZA_156 | No text annotation | ||
IL_6XZA_159 | No text annotation | ||
IL_6XZA_163 | Tandem non-canonical cWW pairs |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
J3_6XZA_001 | 1/A1/46:47, 1/A1/361:367, 1/A1/393:395 | No text annotation | homologous J3_5J7L_001 NA | |
J3_6XZA_027 | 1/A1/46:52, 1/A1/359:367, 1/A1/393:395 | No text annotation | homologous J3_5J7L_050 NA | |
J3_6XZA_002 | 1/A1/586:588, 1/A1/651:654, 1/A1/754:755 | No text annotation | homologous J3_5J7L_002 NA | |
J3_6XZA_028 | 1/A1/586:588, 1/A1/651:655, 1/A1/751:755 | No text annotation | homologous J3_5J7L_051 NA | |
J3_6XZA_003 | 1/A1/672:673, 1/A1/717:725, 1/A1/732:734 | No text annotation | homologous J3_5J7L_003 NA | |
J3_6XZA_004 | 1/A1/826:829, 1/A1/857:861, 1/A1/868:874 | No text annotation | homologous J3_5J7L_004 NA | |
J3_6XZA_005 | 1/A1/936:939, 1/A1/1344:1350, 1/A1/1372:1379 | No text annotation | homologous J3_4LFB_002 J3_85722.1 | |
J3_6XZA_006 | 1/A1/943:946, 1/A1/1235:1237, 1/A1/1337:1340 | No text annotation | homologous J3_4LFB_003 J3_44359.1 | |
J3_6XZA_007 | 1/A1/955:962, 1/A1/973:984, 1/A1/1221:1225 | No text annotation | homologous J3_5J7L_006 NA | |
J3_6XZA_008 | 1/A1/990:993, 1/A1/1045:1047, 1/A1/1210:1215 | No text annotation | homologous J3_5J7L_007 NA | |
J3_6XZA_029 | 1/A1/990:997, 1/A1/1044:1047, 1/A1/1210:1215 | No text annotation | homologous J3_5J7L_053 NA | |
J3_6XZA_009 | 1/A1/1063:1068, 1/A1/1107:1113, 1/A1/1187:1193 | No text annotation | homologous J3_5J7L_008 NA | |
J3_6XZA_037 | 1/A1/1073:1074, 1/A1/1083:1086, 1/A1/1099:1102 | No text annotation | homologous J3_4LFB_017 J3_11018.1 | |
J3_6XZA_011 | 1/A1/1116:1118, 1/A1/1155:1158, 1/A1/1181:1184 | No text annotation | homologous J3_5J7L_010 NA | |
J3_6XZA_030 | 1/A1/1116:1118, 1/A1/1155:1161, 1/A1/1175:1184 | No text annotation | homologous J3_5J7L_054 NA | |
J3_6XZA_012 | 1/A1/1237:1241, 1/A1/1296:1303, 1/A1/1334:1337 | No text annotation | homologous J3_5J7L_011 NA | |
J3_6XZA_013 | 1/A2/30:31, 1/A2/474:481, 1/A2/509:510 | No text annotation | homologous J3_7RQB_001 NA | |
J3_6XZA_031 | 1/A2/30:31, 1/A2/474:484, 1/A2/496:510 | No text annotation | homologous J3_9DFE_002 J3_17917.1 | |
J3_6XZA_032 | 1/A2/32:35, 1/A2/445:461, 1/A2/468:473 | No text annotation | homologous J3_5J7L_067 NA | |
J3_6XZA_014 | 1/A2/56:57, 1/A2/70:76, 1/A2/110:114 | No text annotation | homologous J3_5J7L_037 NA | |
J3_6XZA_033 | 1/A2/297:301, 1/A2/316:325, 1/A2/337:341 | No text annotation | homologous J3_5J7L_068 NA | |
J3_6XZA_015 | 1/A2/683:689, 1/A2/773:775, 1/A2/791:794 | No text annotation | homologous J3_5J7L_038 NA | |
J3_6XZA_016 | 1/A2/698:700, 1/A2/732:736, 1/A2/760:763 | No text annotation | homologous J3_7RQB_005 NA | |
J3_6XZA_018 | 1/A2/1298:1303, 1/A2/1625:1627, 1/A2/1639:1642 | No text annotation | homologous J3_5J7L_041 NA | |
J3_6XZA_019 | 1/A2/1306:1309, 1/A2/1605:1611, 1/A2/1620:1622 | No text annotation | homologous J3_7RQB_008 NA | |
J3_6XZA_020 | 1/A2/1344:1349, 1/A2/1382:1385, 1/A2/1402:1403 | No text annotation | homologous J3_5J7L_043 NA | |
J3_6XZA_034 | 1/A2/1424:1429, 1/A2/1564:1565, 1/A2/1568:1574 | No text annotation | homologous J3_5J7L_069 NA | |
J3_6XZA_021 | 1/A2/2091:2093, 1/A2/2196:2200, 1/A2/2223:2228 | Kink-turn 3-way junction | homologous J3_5J7L_044 NA | |
J3_6XZA_035 | 1/A2/2282:2284, 1/A2/2384:2395, 1/A2/2421:2427 | No text annotation | homologous J3_5J7L_070 NA | |
J3_6XZA_022 | 1/A2/2295:2297, 1/A2/2321:2323, 1/A2/2332:2337 | No text annotation | homologous J3_5J7L_045 NA | |
J3_6XZA_036 | 1/A2/2295:2299, 1/A2/2317:2323, 1/A2/2332:2337 | No text annotation | homologous J3_5J7L_071 NA | |
J3_6XZA_023 | 1/A2/2517:2520, 1/A2/2545:2547, 1/A2/2561:2567 | No text annotation | homologous J3_5J7L_046 NA | |
J3_6XZA_024 | 1/A2/2789:2791, 1/A2/2805:2806, 1/A2/2892:2894 | No text annotation | homologous J3_5J7L_047 NA | |
J3_6XZA_025 | 1/A2/2812:2815, 1/A2/2831:2836, 1/A2/2882:2888 | No text annotation | homologous J3_5J7L_048 NA | |
J3_6XZA_026 | 1/B2/10:16, 1/B2/68:70, 1/B2/106:110 | No text annotation | homologous J3_5J7L_049 NA | |
J4_6XZA_001 | 1/A1/115:122, 1/A1/239:240, 1/A1/286:289, 1/A1/311:312 | No text annotation | homologous J4_5J7L_001 NA | |
J4_6XZA_003 | 1/A1/575:577, 1/A1/764:769, 1/A1/810:821, 1/A1/879:880 | No text annotation | homologous J4_5J7L_003 NA | |
J4_6XZA_004 | 1/A2/268:269, 1/A2/370:375, 1/A2/399:406, 1/A2/421:424 | No text annotation | homologous J4_5J7L_018 NA | |
J4_6XZA_005 | 1/A2/297:301, 1/A2/316:319, 1/A2/323:325, 1/A2/337:341 | No text annotation | homologous J4_5J7L_019 NA | |
J4_6XZA_006 | 1/A2/601:604, 1/A2/624:628, 1/A2/635:638, 1/A2/650:656 | No text annotation | homologous J4_5J7L_020 NA | |
J4_6XZA_007 | 1/A2/1270:1276, 1/A2/1294:1295, 1/A2/1645:1648, 1/A2/2009:2010 | No text annotation | homologous J4_5J7L_021 NA | |
J4_6XZA_008 | 1/A2/1310:1314, 1/A2/1338:1343, 1/A2/1404:1405, 1/A2/1597:1604 | No text annotation | homologous J4_5J7L_022 NA | |
J4_6XZA_009 | 1/A2/1313:1314, 1/A2/1338:1343, 1/A2/1404:1405, 1/A2/1597:1603 | No text annotation | homologous J4_5J7L_023 NA | |
J4_6XZA_010 | 1/A2/1444:1445, 1/A2/1466:1467, 1/A2/1525:1526, 1/A2/1546:1547 | No text annotation | homologous J4_5J7L_024 NA | |
J4_6XZA_011 | 1/A2/1772:1776, 1/A2/1788:1792, 1/A2/1827:1830, 1/A2/1975:1979 | No text annotation | homologous J4_5J7L_025 NA | |
J4_6XZA_012 | 1/A2/1833:1835, 1/A2/1905:1906, 1/A2/1924:1933, 1/A2/1967:1972 | No text annotation | homologous J4_9DFE_008 J4_42306.1 | |
J4_6XZA_013 | 1/A2/2285:2289, 1/A2/2343:2347, 1/A2/2370:2372, 1/A2/2381:2383 | No text annotation | homologous J4_5J7L_027 NA | |
J4_6XZA_014 | 1/A2/2643:2646, 1/A2/2674:2676, 1/A2/2731:2735, 1/A2/2769:2771 | No text annotation | homologous J4_5J7L_028 NA | |
J4_6XZA_015 | 1/f2/7:10, 1/f2/25:27, 1/f2/43:49, 1/f2/65:66 | tRNA junction | homologous J4_9DFC_015 NA | |
J5_6XZA_003 | 1/A1/58:61, 1/A1/106:113, 1/A1/314:316, 1/A1/337:339, 1/A1/350:354 | No text annotation | homologous J5_5J7L_003 NA | |
J5_6XZA_004 | 1/A2/47:54, 1/A2/116:121, 1/A2/130:131, 1/A2/148:150, 1/A2/176:178 | No text annotation | homologous J5_5J7L_013 NA | |
J5_6XZA_005 | 1/A2/531:533, 1/A2/560:564, 1/A2/577:579, 1/A2/1261:1262, 1/A2/2017:2018 | No text annotation | homologous J5_5J7L_014 NA | |
J5_6XZA_006 | 1/A2/584:589, 1/A2/668:671, 1/A2/809:812, 1/A2/1195:1196, 1/A2/1250:1256 | No text annotation | homologous J5_5J7L_015 NA | |
J5_6XZA_007 | 1/A2/1674:1682, 1/A2/1706:1707, 1/A2/1751:1752, 1/A2/1756:1764, 1/A2/1988:1990 | No text annotation | homologous J5_5J7L_016 NA | |
J5_6XZA_008 | 1/A2/2057:2064, 1/A2/2446:2453, 1/A2/2500:2507, 1/A2/2582:2588, 1/A2/2606:2611 | No text annotation | ||
J5_6XZA_009 | 1/A2/2074:2077, 1/A2/2243:2246, 1/A2/2258:2259, 1/A2/2281:2282, 1/A2/2427:2435 | No text annotation | ||
J6_6XZA_001 | 1/A2/45:46, 1/A2/179:183, 1/A2/214:224, 1/A2/231:235, 1/A2/262:266, 1/A2/426:433 | No text annotation | ||
J6_6XZA_002 | 1/A2/2074:2077, 1/A2/2243:2246, 1/A2/2258:2259, 1/A2/2281:2284, 1/A2/2384:2395, 1/A2/2421:2435 | No text annotation | ||
J7_6XZA_001 | 1/A2/8:15, 1/A2/525:531, 1/A2/2018:2023, 1/A2/2040:2043, 1/A2/2625:2630, 1/A2/2788:2789, 1/A2/2894:2895 | No text annotation | ||
J7_6XZA_002 | 1/A2/817:822, 1/A2/835:838, 1/A2/940:946, 1/A2/971:976, 1/A2/987:991, 1/A2/1163:1164, 1/A2/1185:1190 | No text annotation |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
J3_6XZA_010 | No text annotation | ||
J3_6XZA_017 | No text annotation | ||
J4_6XZA_002 | No text annotation | ||
J5_6XZA_001 | No text annotation | ||
J5_6XZA_002 | No text annotation |
Coloring options: