HL_6XZA_057

3D structure

PDB id

6XZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGGGUCACUUAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XZA|1|A2|G|880
6XZA|1|A2|G|881
6XZA|1|A2|G|882
6XZA|1|A2|G|883
6XZA|1|A2|U|884
6XZA|1|A2|C|885
6XZA|1|A2|A|892
6XZA|1|A2|C|893
6XZA|1|A2|U|894
6XZA|1|A2|U|895
6XZA|1|A2|A|896
6XZA|1|A2|C|897

Current chains

Chain A2

23S rRNA

Nearby chains

Chain S1

30S ribosomal protein S19