HL_6XZB_021
3D structure
- PDB id
- 6XZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GAUAACGC
- Length
- 8 nucleotides
- Bulged bases
- 6XZB|1|A1|A|968, 6XZB|1|A1|G|971
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XZB_021 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1081
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6XZB|1|A1|G|963
6XZB|1|A1|A|964
6XZB|1|A1|U|965
6XZB|1|A1|A|968
6XZB|1|A1|A|969
6XZB|1|A1|C|970
6XZB|1|A1|G|971
6XZB|1|A1|C|972
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain I1
- 30S ribosomal protein S9
- Chain J1
- 30S ribosomal protein S10
- Chain M1
- 30S ribosomal protein S13
- Chain g2
- Transfer RNA; tRNA
Coloring options: