HL_6Y2L_024

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y2L_024 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2854

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6Y2L|1|L5|C|1436
6Y2L|1|L5|C|1437
6Y2L|1|L5|U|1438
6Y2L|1|L5|C|1439
6Y2L|1|L5|U|1440
6Y2L|1|L5|C|1441
6Y2L|1|L5|C|1442
6Y2L|1|L5|A|1443
6Y2L|1|L5|G|1444
6Y2L|1|L5|U|1445
6Y2L|1|L5|C|1446
6Y2L|1|L5|C|1447
6Y2L|1|L5|G|1448

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7