HL_6Y2L_062

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

6Y2L|1|L5|A|4214, 6Y2L|1|L5|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y2L_062 not in the Motif Atlas

Homologous match to HL_5TBW_055

Geometric discrepancy: 0.1247

The information below is about HL_5TBW_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.9

Basepair signature

cWW-tHH-cWW-tHS-F-F-tWW

Number of instances in this motif group

8

Unit IDs

6Y2L|1|L5|U|4210
6Y2L|1|L5|C|4211
6Y2L|1|L5|A|4212
6Y2L|1|L5|A|4213
6Y2L|1|L5|A|4214
6Y2L|1|L5|C|4215
6Y2L|1|L5|G|4216
6Y2L|1|L5|G|4217
6Y2L|1|L5|U|4218
6Y2L|1|L5|A|4219
6Y2L|1|L5|A|4220
6Y2L|1|L5|C|4221
6Y2L|1|L5|G|4222

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29