HL_6Y3G_001

3D structure

PDB id

6Y3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of phenylalanine tRNA from Escherichia coli

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAG(H2U)CGG(H2U)AG

Length

10 nucleotides

Bulged bases

6Y3G|1|F|C|17, 6Y3G|1|F|G|18, 6Y3G|1|F|G|19

QA status

Modified nucleotides: H2U

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y3G_001 not in the Motif Atlas

Homologous match to HL_7YSE_001

Geometric discrepancy: 0.1215

The information below is about HL_7YSE_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y3G|1|F|C|13
6Y3G|1|F|A|14
6Y3G|1|F|G|15
6Y3G|1|F|H2U|16
6Y3G|1|F|C|17
6Y3G|1|F|G|18
6Y3G|1|F|G|19
6Y3G|1|F|H2U|20
6Y3G|1|F|A|21
6Y3G|1|F|G|22

Current chains

Chain F

RNA (75-MER)

Nearby chains