HL_6Y69_059
3D structure
- PDB id
- 6Y69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UGAAGUAG
- Length
- 8 nucleotides
- Bulged bases
- 6Y69|1|A|G|2529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Y69_059 not in the Motif Atlas
- Homologous match to HL_5J7L_194
- Geometric discrepancy: 0.0735
- The information below is about HL_5J7L_194
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_31585.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 20
Unit IDs
6Y69|1|A|U|2528
6Y69|1|A|G|2529
6Y69|1|A|A|2530
6Y69|1|A|A|2531
6Y69|1|A|G|2532
6Y69|1|A|U|2533
6Y69|1|A|A|2534
6Y69|1|A|G|2535
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
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