HL_6Y69_065

3D structure

PDB id

6Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

6Y69|1|A|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y69_065 not in the Motif Atlas

Geometric match to HL_5J7L_176

Geometric discrepancy: 0.1845

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6Y69|1|A|U|2796
6Y69|1|A|U|2797
6Y69|1|A|U|2798
6Y69|1|A|A|2799

Current chains

Chain A

23S ribosomal RNA

Nearby chains