HL_6Y69_090
3D structure
- PDB id
- 6Y69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 6Y69|1|a|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Y69_090 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1246
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6Y69|1|a|G|963
6Y69|1|a|A|964
6Y69|1|a|U|965
6Y69|1|a|G|966
6Y69|1|a|C|967
6Y69|1|a|A|968
6Y69|1|a|A|969
6Y69|1|a|C|970
6Y69|1|a|G|971
6Y69|1|a|C|972
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain x
- Ribosome hibernation promoting factor
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