HL_6Y7C_029

3D structure

PDB id

6Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUGCUUAAUUGCG

Length

13 nucleotides

Bulged bases

6Y7C|1|2|A|1312, 6Y7C|1|2|U|1314

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y7C|1|2|C|1306
6Y7C|1|2|U|1307
6Y7C|1|2|G|1308
6Y7C|1|2|C|1309
6Y7C|1|2|U|1310
6Y7C|1|2|U|1311
6Y7C|1|2|A|1312
6Y7C|1|2|A|1313
6Y7C|1|2|U|1314
6Y7C|1|2|U|1315
6Y7C|1|2|G|1316
6Y7C|1|2|C|1317
6Y7C|1|2|G|1318

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain A

40S ribosomal protein S0-A

Chain R

40S ribosomal protein S17-A