HL_6YAM_011

3D structure

PDB id

6YAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

6YAM|1|2|G|375

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAM|1|2|G|367
6YAM|1|2|U|368
6YAM|1|2|C|369
6YAM|1|2|G|370
6YAM|1|2|C|371
6YAM|1|2|C|372
6YAM|1|2|G|373
6YAM|1|2|U|374
6YAM|1|2|G|375
6YAM|1|2|C|376
6YAM|1|2|C|377

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain K

40S ribosomal protein eS8

Chain N

40S ribosomal protein uS17