HL_6YBW_007

3D structure

PDB id

6YBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translational initiation complex - 40S body

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

6YBW|1|A|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YBW|1|A|G|377
6YBW|1|A|U|378
6YBW|1|A|C|379
6YBW|1|A|G|380
6YBW|1|A|C|381
6YBW|1|A|C|382
6YBW|1|A|G|383
6YBW|1|A|U|384
6YBW|1|A|G|385
6YBW|1|A|C|386
6YBW|1|A|C|387

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S11

Chain R

40S ribosomal protein S8