HL_6YDP_035

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUUAG

Length

6 nucleotides

Bulged bases

6YDP|1|BA|U|373, 6YDP|1|BA|A|376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6YDP_035 not in the Motif Atlas

Geometric match to HL_5J7L_157

Geometric discrepancy: 0.1607

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

6YDP|1|BA|U|372
6YDP|1|BA|U|373
6YDP|1|BA|U|374
6YDP|1|BA|U|375
6YDP|1|BA|A|376
6YDP|1|BA|G|377

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BP

uL15m