HL_6YDP_063
3D structure
- PDB id
- 6YDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAUGAUUUAAUCUUAACCU
- Length
- 19 nucleotides
- Bulged bases
- 6YDP|1|BA|U|1521, 6YDP|1|BA|C|1525, 6YDP|1|BA|U|1527
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YDP|1|BA|A|1514
6YDP|1|BA|A|1515
6YDP|1|BA|U|1516
6YDP|1|BA|G|1517
6YDP|1|BA|A|1518
6YDP|1|BA|U|1519
6YDP|1|BA|U|1520
6YDP|1|BA|U|1521
6YDP|1|BA|A|1522
6YDP|1|BA|A|1523
6YDP|1|BA|U|1524
6YDP|1|BA|C|1525
6YDP|1|BA|U|1526
6YDP|1|BA|U|1527
6YDP|1|BA|A|1528
6YDP|1|BA|A|1529
6YDP|1|BA|C|1530
6YDP|1|BA|C|1531
6YDP|1|BA|U|1532
Current chains
- Chain BA
- 12S rRNA
Nearby chains
- Chain B9
- Ribosomal protein
- Chain BN
- uL13m
- Chain Bp
- mL53
- Chain Bx
- Mitochondrial ribosomal protein S18A
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