HL_6YHS_047
3D structure
- PDB id
- 6YHS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-amikacin complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 6YHS|1|1|U|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YHS_047 not in the Motif Atlas
- Homologous match to HL_5J7L_182
- Geometric discrepancy: 0.08
- The information below is about HL_5J7L_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6YHS|1|1|G|1938
6YHS|1|1|G|1939
6YHS|1|1|U|1940
6YHS|1|1|A|1941
6YHS|1|1|A|1942
6YHS|1|1|G|1943
6YHS|1|1|U|1944
6YHS|1|1|U|1945
6YHS|1|1|C|1946
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L14
Coloring options: