HL_6YHS_064
3D structure
- PDB id
- 6YHS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-amikacin complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 6YHS|1|1|G|2740, 6YHS|1|1|C|2744
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YHS_064 not in the Motif Atlas
- Homologous match to HL_5J7L_199
- Geometric discrepancy: 0.078
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
6YHS|1|1|C|2734
6YHS|1|1|U|2735
6YHS|1|1|G|2736
6YHS|1|1|A|2737
6YHS|1|1|A|2738
6YHS|1|1|A|2739
6YHS|1|1|G|2740
6YHS|1|1|C|2741
6YHS|1|1|A|2742
6YHS|1|1|U|2743
6YHS|1|1|C|2744
6YHS|1|1|U|2745
6YHS|1|1|A|2746
6YHS|1|1|A|2747
6YHS|1|1|G|2748
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
- Chain F
- 50S ribosomal protein L13
- Chain b
- 50S ribosomal protein L36
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