HL_6YLG_067
3D structure
- PDB id
- 6YLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGAAAGG
- Length
- 8 nucleotides
- Bulged bases
- 6YLG|1|1|A|3243, 6YLG|1|1|A|3244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YLG_067 not in the Motif Atlas
- Homologous match to HL_5TBW_069
- Geometric discrepancy: 0.1043
- The information below is about HL_5TBW_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_24596.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6YLG|1|1|C|3240
6YLG|1|1|G|3241
6YLG|1|1|G|3242
6YLG|1|1|A|3243
6YLG|1|1|A|3244
6YLG|1|1|A|3245
6YLG|1|1|G|3246
6YLG|1|1|G|3247
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L16-A
- Chain c
- Ribosome biogenesis protein ALB1
- Chain z
- UPF0642 protein YBL028C
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