HL_6YSI_055

3D structure

PDB id

6YSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6YSI_055 not in the Motif Atlas

Homologous match to HL_5J7L_191

Geometric discrepancy: 0.0572

The information below is about HL_5J7L_191

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6YSI|1|1|C|2363
6YSI|1|1|G|2364
6YSI|1|1|A|2365
6YSI|1|1|A|2366
6YSI|1|1|A|2367
6YSI|1|1|G|2368

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L18

Chain Y

50S ribosomal protein L33