HL_6YSS_083
3D structure
- PDB id
- 6YSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCAGCC(G7M)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YSS_083 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.2113
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6YSS|1|a|G|521
6YSS|1|a|C|522
6YSS|1|a|A|523
6YSS|1|a|G|524
6YSS|1|a|C|525
6YSS|1|a|C|526
6YSS|1|a|G7M|527
6YSS|1|a|C|528
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain y
- Alternative stalled-ribosome rescue factor B
Coloring options: