HL_6YST_106
3D structure
- PDB id
- 6YST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAGCC(G7M)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YST_106 not in the Motif Atlas
- Homologous match to HL_5J7L_205
- Geometric discrepancy: 0.1196
- The information below is about HL_5J7L_205
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6YST|1|a|C|522
6YST|1|a|A|523
6YST|1|a|G|524
6YST|1|a|C|525
6YST|1|a|C|526
6YST|1|a|G7M|527
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain y
- Alternative stalled-ribosome rescue factor B
Coloring options: