HL_6YT9_004
3D structure
- PDB id
- 6YT9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit body
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUAAAGGC
- Length
- 9 nucleotides
- Bulged bases
- 6YT9|1|2|G|262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YT9_004 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.1111
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6YT9|1|2|G|255
6YT9|1|2|G|256
6YT9|1|2|U|257
6YT9|1|2|A|258
6YT9|1|2|A|259
6YT9|1|2|A|260
6YT9|1|2|G|261
6YT9|1|2|G|262
6YT9|1|2|C|263
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain r
- 30S ribosomal protein S17
- Chain u
- 30S ribosomal protein S20
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