HL_6Z1P_013
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUUAUUG
- Length
- 8 nucleotides
- Bulged bases
- 6Z1P|1|Ab|U|440, 6Z1P|1|Ab|U|443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_013 not in the Motif Atlas
- Homologous match to HL_7RQB_017
- Geometric discrepancy: 0.2455
- The information below is about HL_7RQB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Ab|C|437
6Z1P|1|Ab|U|438
6Z1P|1|Ab|U|439
6Z1P|1|Ab|U|440
6Z1P|1|Ab|A|441
6Z1P|1|Ab|U|442
6Z1P|1|Ab|U|443
6Z1P|1|Ab|G|444
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain AJ
- Ribosomal protein L51/S25/CI-B8 domain protein
- Chain AV
- Iron-binding zinc finger CDGSH type protein
- Chain Aa
- LSU rRNA_1
- Chain Au
- 50S ribosomal protein L20
- Chain Aw
- Ribosomal protein L22/L17e
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